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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000458799 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 399aa MW: 45699.4 Da PI: 6.6903 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.2 | 5.7e-52 | 16 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +ppGfrFhPt+eel+++yLkkkv++++++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg r+nrat++g+Wkatg+dk ++ MDP0000458799 16 VPPGFRFHPTEEELLQYYLKKKVSNQRIDL-DVIREVDLNKLEPWDIQEKCKIgtxPQNDWYFFSHKDKKYPTGXRTNRATAAGFWKATGRDKVIC 110 69****************************.9***************964444223456************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + + +g++ktLvfykgrap+g+k+dW+mheyrl MDP0000458799 111 S-NCRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9.8889***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-57 | 10 | 178 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.57 | 16 | 178 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.3E-28 | 17 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
MAPENMSISV NGQSQVPPGF RFHPTEEELL QYYLKKKVSN QRIDLDVIRE VDLNKLEPWD 60 IQEKCKIGTX PQNDWYFFSH KDKKYPTGXR TNRATAAGFW KATGRDKVIC SNCRRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDNNTS NCNITNVPTV VGDAAQEEGW VVCRXFKKKN 180 LHKILSSPIL NTTTSIXTET RNGQSLFDSC PEGALEPILH YMGRTCNEEX NEAYINNNST 240 RFNLQPXNXG ISNTSNHNGF HEKFLKLPTL DSPNSTSSQD CYQPNIHEGM MVTENNNNPV 300 SPFTDHHQNM DYHAHHMDSG ITNWAALDRL VASQLNGQTE TSRQLTCFNI TDPYDNXDHD 360 HERQLPSTLR GSLSSSNTYH AXHDYNNSEI DLWNFDRQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-50 | 10 | 180 | 9 | 170 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ919963 | 0.0 | KJ919963.1 Eriobotrya japonica NAC2 transcription factor (NAC2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008352111.1 | 0.0 | PREDICTED: NAC domain-containing protein 43-like | ||||
Swissprot | Q84WP6 | 1e-133 | NAC43_ARATH; NAC domain-containing protein 43 | ||||
TrEMBL | A0A0H3VAS8 | 0.0 | A0A0H3VAS8_9R | ||||
STRING | VIT_15s0048g02660.t01 | 1e-159 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3031 | 33 | 74 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-132 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000458799 |